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BioJavaDomainModel: org.biojavax.bio.class.violet

File org.biojavax.bio.class.violet, 13.0 KB (added by r.bruskiewich, 16 years ago)
org.biojavax.bio Violet UML file

Line
1	<?xml version="1.0" encoding="UTF-8"?>
2	<java version="1.6.0_04" class="java.beans.XMLDecoder">
3	<object class="com.horstmann.violet.ClassDiagramGraph">
4	<void method="addNode">
5	<object id="InterfaceNode0" class="com.horstmann.violet.InterfaceNode">
6	<void property="bounds">
7	<object class="java.awt.geom.Rectangle2D$Double">
8	<void method="setRect">
9	<double>310.0</double>
10	<double>100.0</double>
11	<double>140.0</double>
12	<double>100.0</double>
13	</void>
14	</object>
15	</void>
16	<void property="methods">
17	<void property="text">
18	<string>getRank():int
19	setRank(int rank)
20	</string>
21	</void>
22	</void>
23	<void property="name">
24	<void property="text">
25	<string>Â«interfaceÂ»
26	BioEntryRelationship</string>
27	</void>
28	</void>
29	</object>
30	<object class="java.awt.geom.Point2D$Double">
31	<void method="setLocation">
32	<double>310.0</double>
33	<double>100.0</double>
34	</void>
35	</object>
36	</void>
37	<void method="addNode">
38	<object id="InterfaceNode1" class="com.horstmann.violet.InterfaceNode">
39	<void property="bounds">
40	<object class="java.awt.geom.Rectangle2D$Double">
41	<void method="setRect">
42	<double>40.0</double>
43	<double>120.0</double>
44	<double>160.0</double>
45	<double>60.0</double>
46	</void>
47	</object>
48	</void>
49	<void property="name">
50	<void property="text">
51	<string>Â«interfaceÂ»
52	org.biojavax.ontology.Term</string>
53	</void>
54	</void>
55	</object>
56	<object class="java.awt.geom.Point2D$Double">
57	<void method="setLocation">
58	<double>40.0</double>
59	<double>120.0</double>
60	</void>
61	</object>
62	</void>
63	<void method="addNode">
64	<object id="InterfaceNode2" class="com.horstmann.violet.InterfaceNode">
65	<void property="bounds">
66	<object class="java.awt.geom.Rectangle2D$Double">
67	<void method="setRect">
68	<double>570.0</double>
69	<double>280.0</double>
70	<double>140.0</double>
71	<double>160.0</double>
72	</void>
73	</object>
74	</void>
75	<void property="methods">
76	<void property="text">
77	<string>getName():String
78	getAccession():String
79	getIdentifier():String
80	getDivision():String
81	getDescription():String
82	getVersion():int</string>
83	</void>
84	</void>
85	<void property="name">
86	<void property="text">
87	<string>Â«interfaceÂ»
88	BioEntry</string>
89	</void>
90	</void>
91	</object>
92	<object class="java.awt.geom.Point2D$Double">
93	<void method="setLocation">
94	<double>570.0</double>
95	<double>280.0</double>
96	</void>
97	</object>
98	</void>
99	<void method="addNode">
100	<object id="NoteNode0" class="com.horstmann.violet.NoteNode">
101	<void property="bounds">
102	<object class="java.awt.geom.Rectangle2D$Double">
103	<void method="setRect">
104	<double>170.0</double>
105	<double>40.0</double>
106	<double>140.0</double>
107	<double>40.0</double>
108	</void>
109	</object>
110	</void>
111	<void property="bounds">
112	<void method="setRect">
113	<double>170.0</double>
114	<double>40.0</double>
115	<double>140.0</double>
116	<double>40.0</double>
117	</void>
118	</void>
119	<void property="text">
120	<void property="text">
121	<string>should "term" be "type"?</string>
122	</void>
123	</void>
124	</object>
125	<object class="java.awt.geom.Point2D$Double">
126	<void method="setLocation">
127	<double>170.0</double>
128	<double>40.0</double>
129	</void>
130	</object>
131	</void>
132	<void method="addNode">
133	<object id="PointNode0" class="com.horstmann.violet.PointNode">
134	<void property="bounds">
135	<object class="java.awt.geom.Rectangle2D$Double">
136	<void method="setRect">
137	<double>209.0</double>
138	<double>130.0</double>
139	<double>0.0</double>
140	<double>0.0</double>
141	</void>
142	</object>
143	</void>
144	<void property="bounds">
145	<void method="setRect">
146	<double>209.0</double>
147	<double>130.0</double>
148	<double>0.0</double>
149	<double>0.0</double>
150	</void>
151	</void>
152	</object>
153	<object class="java.awt.geom.Point2D$Double">
154	<void method="setLocation">
155	<double>209.0</double>
156	<double>130.0</double>
157	</void>
158	</object>
159	</void>
160	<void method="addNode">
161	<object id="InterfaceNode3" class="com.horstmann.violet.InterfaceNode">
162	<void property="bounds">
163	<object class="java.awt.geom.Rectangle2D$Double">
164	<void method="setRect">
165	<double>960.0</double>
166	<double>60.0</double>
167	<double>160.0</double>
168	<double>60.0</double>
169	</void>
170	</object>
171	</void>
172	<void property="name">
173	<void property="text">
174	<string>Â«interfaceÂ»
175	org.biojavax.Namespace</string>
176	</void>
177	</void>
178	</object>
179	<object class="java.awt.geom.Point2D$Double">
180	<void method="setLocation">
181	<double>960.0</double>
182	<double>60.0</double>
183	</void>
184	</object>
185	</void>
186	<void method="addNode">
187	<object id="InterfaceNode4" class="com.horstmann.violet.InterfaceNode">
188	<void property="bounds">
189	<object class="java.awt.geom.Rectangle2D$Double">
190	<void method="setRect">
191	<double>960.0</double>
192	<double>190.0</double>
193	<double>100.0</double>
194	<double>60.0</double>
195	</void>
196	</object>
197	</void>
198	<void property="name">
199	<void property="text">
200	<string>Â«interfaceÂ»
201	taxa.NCBITaxon</string>
202	</void>
203	</void>
204	</object>
205	<object class="java.awt.geom.Point2D$Double">
206	<void method="setLocation">
207	<double>960.0</double>
208	<double>190.0</double>
209	</void>
210	</object>
211	</void>
212	<void method="addNode">
213	<object id="InterfaceNode5" class="com.horstmann.violet.InterfaceNode">
214	<void property="bounds">
215	<object class="java.awt.geom.Rectangle2D$Double">
216	<void method="setRect">
217	<double>960.0</double>
218	<double>330.0</double>
219	<double>100.0</double>
220	<double>60.0</double>
221	</void>
222	</object>
223	</void>
224	<void property="name">
225	<void property="text">
226	<string>Â«interfaceÂ»
227	RankedDocRef</string>
228	</void>
229	</void>
230	</object>
231	<object class="java.awt.geom.Point2D$Double">
232	<void method="setLocation">
233	<double>960.0</double>
234	<double>330.0</double>
235	</void>
236	</object>
237	</void>
238	<void method="addNode">
239	<object id="InterfaceNode6" class="com.horstmann.violet.InterfaceNode">
240	<void property="bounds">
241	<object class="java.awt.geom.Rectangle2D$Double">
242	<void method="setRect">
243	<double>960.0</double>
244	<double>470.0</double>
245	<double>140.0</double>
246	<double>60.0</double>
247	</void>
248	</object>
249	</void>
250	<void property="name">
251	<void property="text">
252	<string>Â«interfaceÂ»
253	org.biojavax.Comment</string>
254	</void>
255	</void>
256	</object>
257	<object class="java.awt.geom.Point2D$Double">
258	<void method="setLocation">
259	<double>960.0</double>
260	<double>470.0</double>
261	</void>
262	</object>
263	</void>
264	<void method="addNode">
265	<object id="InterfaceNode7" class="com.horstmann.violet.InterfaceNode">
266	<void property="bounds">
267	<object class="java.awt.geom.Rectangle2D$Double">
268	<void method="setRect">
269	<double>960.0</double>
270	<double>610.0</double>
271	<double>120.0</double>
272	<double>60.0</double>
273	</void>
274	</object>
275	</void>
276	<void property="name">
277	<void property="text">
278	<string>Â«interfaceÂ»
279	RankedCrossRef</string>
280	</void>
281	</void>
282	</object>
283	<object class="java.awt.geom.Point2D$Double">
284	<void method="setLocation">
285	<double>960.0</double>
286	<double>610.0</double>
287	</void>
288	</object>
289	</void>
290	<void method="addNode">
291	<object id="InterfaceNode8" class="com.horstmann.violet.InterfaceNode">
292	<void property="bounds">
293	<object class="java.awt.geom.Rectangle2D$Double">
294	<void method="setRect">
295	<double>960.0</double>
296	<double>730.0</double>
297	<double>100.0</double>
298	<double>60.0</double>
299	</void>
300	</object>
301	</void>
302	<void property="name">
303	<void property="text">
304	<string>Â«interfaceÂ»
305	Annotation</string>
306	</void>
307	</void>
308	</object>
309	<object class="java.awt.geom.Point2D$Double">
310	<void method="setLocation">
311	<double>960.0</double>
312	<double>730.0</double>
313	</void>
314	</object>
315	</void>
316	<void method="connect">
317	<object class="com.horstmann.violet.ClassRelationshipEdge">
318	<void property="bentStyle">
319	<object class="com.horstmann.violet.BentStyle" field="HVH"/>
320	</void>
321	<void property="endArrowHead">
322	<object class="com.horstmann.violet.ArrowHead" field="V"/>
323	</void>
324	<void property="endLabel">
325	<string>term</string>
326	</void>
327	</object>
328	<object idref="InterfaceNode0"/>
329	<object idref="InterfaceNode1"/>
330	</void>
331	<void method="connect">
332	<object class="com.horstmann.violet.NoteEdge"/>
333	<object idref="NoteNode0"/>
334	<object idref="PointNode0"/>
335	</void>
336	<void method="connect">
337	<object class="com.horstmann.violet.ClassRelationshipEdge">
338	<void property="bentStyle">
339	<object class="com.horstmann.violet.BentStyle" field="HV"/>
340	</void>
341	<void property="endArrowHead">
342	<object class="com.horstmann.violet.ArrowHead" field="V"/>
343	</void>
344	<void property="endLabel">
345	<string>subject</string>
346	</void>
347	</object>
348	<object idref="InterfaceNode0"/>
349	<object idref="InterfaceNode2"/>
350	</void>
351	<void method="connect">
352	<object class="com.horstmann.violet.ClassRelationshipEdge">
353	<void property="bentStyle">
354	<object class="com.horstmann.violet.BentStyle" field="VH"/>
355	</void>
356	<void property="endArrowHead">
357	<object class="com.horstmann.violet.ArrowHead" field="V"/>
358	</void>
359	<void property="endLabel">
360	<string>object</string>
361	</void>
362	</object>
363	<object idref="InterfaceNode0"/>
364	<object idref="InterfaceNode2"/>
365	</void>
366	<void method="connect">
367	<object class="com.horstmann.violet.ClassRelationshipEdge">
368	<void property="bentStyle">
369	<object class="com.horstmann.violet.BentStyle" field="HVH"/>
370	</void>
371	<void property="endArrowHead">
372	<object class="com.horstmann.violet.ArrowHead" field="V"/>
373	</void>
374	<void property="endLabel">
375	<string>namespace</string>
376	</void>
377	</object>
378	<object idref="InterfaceNode2"/>
379	<object idref="InterfaceNode3"/>
380	</void>
381	<void method="connect">
382	<object class="com.horstmann.violet.ClassRelationshipEdge">
383	<void property="bentStyle">
384	<object class="com.horstmann.violet.BentStyle" field="HVH"/>
385	</void>
386	<void property="endArrowHead">
387	<object class="com.horstmann.violet.ArrowHead" field="V"/>
388	</void>
389	<void property="endLabel">
390	<string>taxon</string>
391	</void>
392	</object>
393	<object idref="InterfaceNode2"/>
394	<object idref="InterfaceNode4"/>
395	</void>
396	<void method="connect">
397	<object class="com.horstmann.violet.ClassRelationshipEdge">
398	<void property="bentStyle">
399	<object class="com.horstmann.violet.BentStyle" field="HVH"/>
400	</void>
401	<void property="endArrowHead">
402	<object class="com.horstmann.violet.ArrowHead" field="V"/>
403	</void>
404	<void property="endLabel">
405	<string>RankedDocRef *</string>
406	</void>
407	</object>
408	<object idref="InterfaceNode2"/>
409	<object idref="InterfaceNode5"/>
410	</void>
411	<void method="connect">
412	<object class="com.horstmann.violet.ClassRelationshipEdge">
413	<void property="bentStyle">
414	<object class="com.horstmann.violet.BentStyle" field="HVH"/>
415	</void>
416	<void property="endArrowHead">
417	<object class="com.horstmann.violet.ArrowHead" field="V"/>
418	</void>
419	<void property="endLabel">
420	<string>comment*</string>
421	</void>
422	</object>
423	<object idref="InterfaceNode2"/>
424	<object idref="InterfaceNode6"/>
425	</void>
426	<void method="connect">
427	<object class="com.horstmann.violet.ClassRelationshipEdge">
428	<void property="bentStyle">
429	<object class="com.horstmann.violet.BentStyle" field="HVH"/>
430	</void>
431	<void property="endArrowHead">
432	<object class="com.horstmann.violet.ArrowHead" field="V"/>
433	</void>
434	<void property="endLabel">
435	<string>rankedCrossRef *</string>
436	</void>
437	</object>
438	<object idref="InterfaceNode2"/>
439	<object idref="InterfaceNode7"/>
440	</void>
441	<void method="connect">
442	<object class="com.horstmann.violet.ClassRelationshipEdge">
443	<void property="bentStyle">
444	<object class="com.horstmann.violet.BentStyle" field="HVH"/>
445	</void>
446	<void property="endArrowHead">
447	<object class="com.horstmann.violet.ArrowHead" field="V"/>
448	</void>
449	<void property="endLabel">
450	<string>annotation</string>
451	</void>
452	</object>
453	<object idref="InterfaceNode2"/>
454	<object idref="InterfaceNode8"/>
455	</void>
456	</object>
457	</java>

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