ID DOF37_ARATH Reviewed; 296 AA. AC Q43385; Q8GYW3; Q9SAF9; DT 19-OCT-2002, integrated into UniProtKB/Swiss-Prot. DT 01-JUN-2001, sequence version 2. DT 04-DEC-2007, entry version 60. DE Dof zinc finger protein DOF3.7 (AtDOF3.7) (Dof affecting germination DE 1) (Transcription factor BBFa) (AtBBFa) (RolB domain B factor a). GN Name=DOF3.7; Synonyms=BBFA, DAG1; OrderedLocusNames=At3g61850; GN ORFNames=F21F14.20; OS Arabidopsis thaliana (Mouse-ear cress). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; OC rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis. OX NCBI_TaxID=3702; RN [1] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA] (ISOFORM 1). RC STRAIN=cv. Columbia, and cv. Wassilewskija; RX MEDLINE=96367665; PubMed=8771779; RA de Paolis A., Sabatini S., de Pascalis L., Costantino P., Capone I.; RT "A rolB regulatory factor belongs to a new class of single zinc finger RT plant proteins."; RL Plant J. 10:215-223(1996). RN [2] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] (ISOFORM 1). RC STRAIN=cv. Wassilewskija; RX MEDLINE=20107030; PubMed=10640273; RA Papi M., Sabatini S., Bouchez D., Camilleri C., Costantino P., RA Vittorioso P.; RT "Identification and disruption of an Arabidopsis zinc finger gene RT controlling seed germination."; RL Genes Dev. 14:28-33(2000). RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Columbia; RX MEDLINE=21016720; PubMed=11130713; DOI=10.1038/35048706; RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., RA Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., RA Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., RA De Simone V., Choisne N., Artiguenave F., Robert C., Brottier P., RA Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., RA Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., RA Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., RA Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., RA Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., RA Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., RA Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., RA Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., RA Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., RA Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., RA Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., RA Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., RA Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., RA Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., RA Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., RA Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., RA Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., RA Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., RA Watanabe A., Yamada M., Yasuda M., Tabata S.; RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis RT thaliana."; RL Nature 408:820-822(2000). RN [4] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). RC STRAIN=cv. Columbia; RX MEDLINE=21932900; PubMed=11910074; DOI=10.1126/science.1071006; RA Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T., RA Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., RA Hayashizaki Y., Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., RA Shibata K., Shinagawa A., Shinozaki K.; RT "Functional annotation of a full-length Arabidopsis cDNA collection."; RL Science 296:141-145(2002). RN [5] RP CHARACTERIZATION. RX MEDLINE=21831160; PubMed=11842145; DOI=10.1104/pp.010488; RA Papi M., Sabatini S., Altamura M.M., Hennig L., Schaefer E., RA Costantino P., Vittorioso P.; RT "Inactivation of the phloem-specific Dof zinc finger gene DAG1 affects RT response to light and integrity of the testa of Arabidopsis seeds."; RL Plant Physiol. 128:411-417(2002). RN [6] RP GENE FAMILY, AND NOMENCLATURE. RX MEDLINE=22364319; PubMed=12475498; DOI=10.1016/S1360-1385(02)02362-2; RA Yanagisawa S.; RT "The Dof family of plant transcription factors."; RL Trends Plant Sci. 7:555-560(2002). CC -!- FUNCTION: Transcription factor specifically involved in the CC maternal control of seed germination. Regulates transcription by CC binding to a 5'-AA[AG]G-3' consensus core sequence. May ensure the CC inactivity of a component that would be activated to trigger CC germination as a consequence of red light perception. CC -!- SUBCELLULAR LOCATION: Nucleus (Probable). CC -!- ALTERNATIVE PRODUCTS: CC Event=Alternative splicing; Named isoforms=2; CC Name=1; CC IsoId=Q43385-1; Sequence=Displayed; CC Name=2; CC IsoId=Q43385-2; Sequence=VSP_008898; CC Note=No experimental confirmation available; CC -!- TISSUE SPECIFICITY: Expressed in the phloem of the mother plant, CC including in roots, stem, leaves and flowers, but not present in CC the seed and embryo. In maturing siliques, found all through the CC funiculus connecting the placenta to the ovule, but not in the CC ovule. CC -!- DEVELOPMENTAL STAGE: Turned off in siliques when they reached full CC maturation. Not expressed in developing or mature embryos. CC -!- MISCELLANEOUS: The regulatory role of DOF3.7/DAG1 appears to be CC opposite to that of DOF2.5/DAG2. Both zinc finger proteins may act CC on a maternal switch that controls seed germination, possibly by CC regulating the same gene(s). CC -!- SIMILARITY: Contains 1 Dof-type zinc finger. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; X97941; CAA66600.2; -; mRNA. DR EMBL; AJ224122; CAB40190.1; -; Genomic_DNA. DR EMBL; AL138642; CAB71892.1; -; Genomic_DNA. DR EMBL; AK117352; BAC42022.1; -; mRNA. DR PIR; T47977; T47977. DR RefSeq; NP_191744.1; -. DR UniGene; At.989; -. DR TRANSFAC; T02699; -. DR GeneID; 825358; -. DR GenomeReviews; BA000014_GR; AT3G61850. DR KEGG; ath:AT3G61850; -. DR GeneFarm; 4410; 446. DR TAIR; At3g61850; -. DR ArrayExpress; Q43385; -. DR GermOnline; AT3G61850; Arabidopsis thaliana. DR InterPro; IPR003851; Znf_Dof. DR Pfam; PF02701; zf-Dof; 1. DR PROSITE; PS01361; ZF_DOF_1; 1. DR PROSITE; PS50884; ZF_DOF_2; 1. PE 1: Evidence at protein level; KW Alternative splicing; Complete proteome; DNA-binding; Germination; KW Metal-binding; Nucleus; Transcription; Transcription regulation; Zinc; KW Zinc-finger. FT CHAIN 1 296 Dof zinc finger protein DOF3.7. FT /FTId=PRO_0000074283. FT ZN_FING 74 128 Dof-type. FT COMPBIAS 173 176 Poly-His. FT VAR_SEQ 1 12 Missing (in isoform 2). FT /FTId=VSP_008898. SQ SEQUENCE 296 AA; 32966 MW; 0D733352776272EB CRC64; MDATKWTQGF QEMINVKPME QMISSTNNNT PQQQPTFIAT NTRPNATASN GGSGGNTNNT ATMETRKARP QEKVNCPRCN STNTKFCYYN NYSLTQPRYF CKGCRRYWTE GGSLRNVPVG GSSRKNKRSS TPLASPSNPK LPDLNPPILF SSQIPNKSNK DLNLLSFPVM QDHHHHALEL LRSNGVSSRG MNTFLPGQMM DSNSVLYSSL GFPTMPDYKQ SNNNLSFSID HHQGIGHNTI NSNQRAQDNN DDMNGASRVL FPFSDMKELS STTQEKSHGN NTYWNGMFSN TGGSSW //