Changes between Version 1 and Version 2 of BioRuby

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Timestamp:
2008/02/13 18:07:42 (10 years ago)
Author:
ngoto
Comment:

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  • BioRuby

    v1 v2  
    2929=== Input (creation of Bio::Sequence object) === 
    3030   * Bio::Sequence#read(str or file?) or Bio::Sequence#input(str or file?) 
    31      * Bio::*#to_biosequence is automatically called 
    32    * Bio::*#to_biosequence 
     31     * Bio::*#to_biosequence is automatically called? 
     32   * Bio::*#to_biosequence implementation? 
    3333 
    3434=== Easy access to Bio::Sequence inside BioRuby === 
    3535   * Bio::Sequence#embl, Bio::Sequence#gb 
    36      * returns a wrapper object that acts as if it is Bio::EMBL or Bio::GenBank objects 
     36     * can access as if it is Bio::EMBL or Bio::GenBank objects 
    3737     * delegates to Bio::Sequence objects (or translation/conversion may be needed) 
     38     * Bio::EMBL changed to Bio::Sequence delegation objects? 
     39       * delayed evaluation? 
    3840 
    3941=== Internal structure of Bio::Sequence ===