Changes between Initial Version and Version 1 of OpenBio*

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Timestamp:
2008/02/11 18:25:41 (11 years ago)
Author:
jan.aerts
Comment:

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  • OpenBio*

    v1 v1  
     1= Random ideas from Jan Aerts = 
     2Mind that this is *very* incomplete. Just to help my really bad memory. 
     3As the issue is interoperability of the Bio* toolkits, we don't have to synchronise the toolkits at the object level, but rather at the interface level. So let's see if each toolkit reads and writes a GenBank/Fasta/... serialization in the same way. Input can either be an original GenBank/Fasta/... file or a dbfetch from any database. 
     4 
     5 * What should be conserved: 
     6  * Tags 
     7  * for a sequence: lower/uppercase 
     8 
     9 * What not necessarily should be conserved: 
     10  * for a sequence over multiple lines: length of each lin