Changes between Version 16 and Version 17 of PDBj-DDBJ-KEGG

Timestamp:

2008/02/13 10:00:51 (17 years ago)

Author:

akinjo

Comment:

--

PDBj-DDBJ-KEGG

@@ -36 +36 @@
 Let's call this "funcanot" workflow.
 
-let hits = BLAST_DAD(fasta)
+let hits = BLAST_DAD(fasta): @DDBJ
 if func_known(hits) then
-  send_to_KEGG( hits )
+  send_to_KEGG( hits ) ;; annotation obtained from KEGG
 else
-   let new_hits = BLAST_PDBj(fasta)
+   let new_hits = BLAST_PDBj(fasta): @DDBJ
      if exists(new_hits) then 
        foreach hit in new_hits do
-          let shits = struct_navi(hit) 
+          let shits = struct_navi(hit) :@PDBj
             if exists(shits) then 
-              send_to_KEGG( shits )
+              send_to_KEGG( shits );; annotation obtained from KEGG
        done
 
@@ -62 +62 @@
 finally got to real work.... (14:00; 2008-02-12)
 Prototyping using Taverna.
- * Taverna can be used with REST-based WS?
+ * Taverna can be used with REST-based WS? -> YES!
 
 
+