Changes between Version 17 and Version 18 of PDBj-DDBJ-KEGG

Timestamp:

2008/02/13 10:03:56 (17 years ago)

Author:

akinjo

Comment:

--

PDBj-DDBJ-KEGG

@@ -36 +36 @@
 Let's call this "funcanot" workflow.
 
-let hits = BLAST_DAD(fasta): @DDBJ
-if func_known(hits) then
-  send_to_KEGG( hits ) ;; annotation obtained from KEGG
-else
-   let new_hits = BLAST_PDBj(fasta): @DDBJ
-     if exists(new_hits) then 
-       foreach hit in new_hits do
-          let shits = struct_navi(hit) :@PDBj
-            if exists(shits) then 
-              send_to_KEGG( shits );; annotation obtained from KEGG
-       done
+let hits = BLAST_DAD(fasta) @DDBJ
+  if func_known(hits) then
+    send_to_KEGG( hits ) ;; annotation obtained from KEGG
+  else
+    let new_hits = BLAST_PDBj(fasta): @DDBJ
+       if exists(new_hits) then 
+         foreach hit in new_hits do
+            let shits = struct_navi(hit) :@PDBj
+              if exists(shits) then 
+                send_to_KEGG( shits );; annotation obtained from KEGG
+
 
 ||input|| amino acid sequence with unknown function||