| 1 | This code does '''not''' work! Please help! Is XMLRPC or SOAP4R better for the initial talking to MOBY. |
| 2 | |
| 3 | {{{ |
| 4 | require 'rubygems' |
| 5 | require 'soap/rpc/driver' |
| 6 | require 'xmlrpc/client' |
| 7 | |
| 8 | class Foo |
| 9 | end |
| 10 | |
| 11 | module Bio |
| 12 | module Moby |
| 13 | module Client |
| 14 | class Central |
| 15 | |
| 16 | URI = 'http://biomoby.org/MOBY/Central' |
| 17 | |
| 18 | def initialize |
| 19 | mobycentral,ontologyser = getDefaultCentral |
| 20 | p mobycentral |
| 21 | p ontologyser |
| 22 | @driver = SOAP::RPC::Driver.new(mobycentral,URI) |
| 23 | @driver.wiredump_dev = STDOUT |
| 24 | @driver2 = XMLRPC::Client.new2(URI) |
| 25 | |
| 26 | begin |
| 27 | p @driver2.call('retrieveServiceNames') |
| 28 | rescue RuntimeError => e |
| 29 | puts "error #{e.inspect}" |
| 30 | end |
| 31 | |
| 32 | @driver.add_method_with_soapaction( |
| 33 | "findService", |
| 34 | "http://biomoby.org/MOBY/Central#findService", |
| 35 | "args" |
| 36 | ) |
| 37 | |
| 38 | end |
| 39 | |
| 40 | def getDefaultCentral |
| 41 | |
| 42 | require 'httpclient' |
| 43 | |
| 44 | client = HTTPClient.new |
| 45 | mobycentral = client.head('http://biomoby.org/mobycentral').header['location'] |
| 46 | ontologyser = client.head('http://biomoby.org/ontologyserver').header['location'] |
| 47 | return mobycentral,ontologyser |
| 48 | end |
| 49 | |
| 50 | def findService(keyword) |
| 51 | message = "<findservice>\n" |
| 52 | message += "<authoritative></authoritative>" |
| 53 | message += "<serviceName>#{keyword}</serviceName>" |
| 54 | message += "<expandObjects>0</expandObjects>" |
| 55 | message += "<expandServices>0</expandServices>" |
| 56 | message += "</findservice>" |
| 57 | #@driver.findService(message) |
| 58 | p @driver2.call('findService',message) |
| 59 | end |
| 60 | |
| 61 | end |
| 62 | end |
| 63 | end |
| 64 | end |
| 65 | |
| 66 | Bio::Moby::Client::Central.new.findService('getGoTerm') |
| 67 | |
| 68 | }}} |